Comparative genomic analysis of 1047 completely sequenced cDNAs from an Arabidopsis-related model halophyte, Thellungiella halophila
作者: Taji TeruakiKomatsu KenjiKatori TakuKawasaki YoshikazuSakata YoichiTanaka ShigeoKobayashi MasatomoToyoda AtsushiSeki MotoakiShinozaki Kazuo
刊名: BMC Plant Biology, 2010, Vol.10 (1), pp.261
来源数据库: Directory of Open Access Journals
原始语种摘要: Abstract Background Thellungiella halophila (also known as T. salsuginea ) is a model halophyte with a small size, short life cycle, and small genome. Thellungiella genes exhibit a high degree of sequence identity with Arabidopsis genes (90% at the cDNA level). We previously generated a full-length enriched cDNA library of T. halophila from various tissues and from whole plants treated with salinity, chilling, freezing stress, or ABA. We determined the DNA sequences of 20 000 cDNAs at both the 5'- and 3' ends, and identified 9569 distinct genes. Results Here, we completely sequenced 1047 Thellungiella full-length cDNAs representing abiotic-stress-related genes, transcription factor genes, and protein phosphatase 2C genes. The predicted coding sequences, 5'-UTRs, and 3'-UTRs were compared...
全文获取路径: DOAJ  (合作)
影响因子:4.354 (2012)

  • Arabidopsis 阿布属
  • halophyte 盐土植物
  • genomic 染色体组的
  • related 有关的
  • completely 完全
  • length 距离
  • cDNA 互补 DNA
  • expression 表示
  • coding 编码
  • splicing 接合