SRNAome and transcriptome analysis provide insight into strawberry fruit ripening
作者: Yunxiang WangWensheng LiHong ChangJiahua ZhouYunbo LuoKaichun ZhangJinhua ZuoBaogang Wang
作者单位: 1Beijing Academy of Forestry and Pomology Sciences, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100093, China
2National R&D Center For Fruit Processing, Beijing 100093, China
3Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture and Rural Affairs, Beijing 100093, China
4Beijing Engineering Research Center for Deciduous Fruit Trees, Beijing 100093, China
5College of Food Science and Nutritional Engineering, China Agricultural University, Beijing 100083, China
6Key Laboratory of Vegetable Postharvest Processing, Ministry of Agriculture, Beijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
刊名: Genomics, 2020, Vol.112 (3), pp.2369-2378
来源数据库: Elsevier Journal
DOI: 10.1016/j.ygeno.2020.01.008
关键词: Strawberry fruit ripeningMiRNAsTranscriptomeDegradome analysis
英文摘要: Abstract(#br)Strawberry fruit ripening is a complex process affected by multiple factors at different regulation levels. To elucidate the regulation mechanisms, the combined analysis of sRNAome and transcriptome were used. A total of 124 known and 190 novel miRNAs were found, 62 of them were significantly differentially expressed (DE). The targets of the DE miRNAs were parsed and several TFs, such as SPL, ARF, WRKY, and TCP, were found to be involved in ripening. Elevated CO 2 can significantly postpone ripening and miR156, miR166f, miR171a, and miR171d were the DE miRNAs. Transcriptome analysis found 313 DE genes related to fruit ripening, including cell wall metabolism-related genes, color-related genes, ethylene-related genes, and genes encoding TFs such as MYB, SPL, NAC, TCP, and ARF....
全文获取路径: Elsevier  (合作)
影响因子:3.01 (2012)

  • strawberry 草莓
  • ripening 成熟
  • fruit 水果
  • analysis 分析
  • insight 识别力
  • provide 规定