A dense SNP-based linkage map for Atlantic salmon ( Salmo salar ) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns
作者: Sigbjørn LienLars GidskehaugThomas MoenBen J HayesPaul R BergWilliam S DavidsonStig W OmholtMatthew P Kent
作者单位: 1Norwegian University of Life Sciences
3Department of Primary Industries Victoria
4Simon Fraser University
刊名: BMC Genomics, 2011, Vol.12 (1)
来源数据库: Springer Nature Journal
DOI: 10.1186/1471-2164-12-615
原始语种摘要: Abstract(#br) Background(#br)The Atlantic salmon genome is in the process of returning to a diploid state after undergoing a whole genome duplication (WGD) event between 25 and100 million years ago. Existing data on the proportion of paralogous sequence variants (PSVs), multisite variants (MSVs) and other types of complex sequence variation suggest that the rediplodization phase is far from over. The aims of this study were to construct a high density linkage map for Atlantic salmon, to characterize the extent of rediploidization and to improve our understanding of genetic differences between sexes in this species.(#br) Results(#br)A linkage map for Atlantic salmon comprising 29 chromosomes and 5650 single nucleotide polymorphisms (SNPs) was constructed using genotyping data from 3297...
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影响因子:4.397 (2012)

  • salar 干盐湖
  • salmon 鲑鱼
  • linkage 连接
  • Atlantic 在西洋的
  • specific 
  • recombination 再化合
  • chromosome 染色体
  • striking 引燃
  • dense 致密的
  • extended 扩展